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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17680950_17681327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17680950 - 17681327

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTGTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AATGCCCTAACT

Flanking Amino Acid:

CLRIINETTAVALAYGIYKQ

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

77.4

0.62

0.9

73.7

36.9

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

64.2

0.52

1.8

80.72

40.5

Associated Gene:

Gene:

HSPA4

Ensembl Gene ID:

ENSAPLG00000002687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002753

17674987 - 17690317

15331