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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17681462_17682978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17681462 - 17682978

Intron Length:

1517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAAGAAT

5'SS Class:

major

3'SS Sequence:

CAATTTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TATTACTGAAGA

Flanking Amino Acid:

VCAFNKGKLKVLATAFDTTL

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

74.8

34.9

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

68.5

0.42

1.1

72.1

37.7

Minor 5ss

-1.7

3.4

48.2

42.2

Minor BPS

55.3

0.16

1.9

70.91

40.6

Associated Gene:

Gene:

HSPA4

Ensembl Gene ID:

ENSAPLG00000002687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002753

17674987 - 17690317

15331