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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17687366_17687858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17687366 - 17687858

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

AACTTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

AATTTGACAACT

Flanking Amino Acid:

DMLNLFIENEGKMIMQDKLE

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

77.9

0.69

0.8

75.9

Major PPT

76.2

0.59

0.9

69.3

40.8

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

44.7

-0.3

2.3

68.71

41.8

Associated Gene:

Gene:

HSPA4

Ensembl Gene ID:

ENSAPLG00000002687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002753

17674987 - 17690317

15331