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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17687985_17688911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17687985 - 17688911

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTGATTGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TCTTGCATAACT

Flanking Amino Acid:

GIYEKFVTEDDRNSFTLKLE

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

76.6

0.6

73.7

41.6

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

63.1

0.49

2.1

84.77

41.8

Associated Gene:

Gene:

HSPA4

Ensembl Gene ID:

ENSAPLG00000002687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002753

17674987 - 17690317

15331