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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_17850966_17851050_F

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
17850966 - 17851050
Intron Length:
85

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GGG|GTCAGCGCG
5'SS Class:
major
3'SS Sequence:
TGCCATTCCACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATCTCAT
U12 Branch Point Sequence:
ATCTCATTAACA
Flanking Amino Acid:
GVREPGRVAWGGCGAPGDRD
Intron Amino Acid Position:
37

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
62.7
0.3
1.4
51.7
43.9
Major BPS
86.1
0.9
0.7
85.7
22.9
Major PPT
71
0.47
0.9
64.3
36.4
Minor 5ss
31.6
-2.1
3.1
31.6
42.2
Minor BPS
72.7
0.71
1.6
79.19
36.8

Associated Gene:

Gene:
ARHGAP26
Ensembl Gene ID:
ENSAPLG00000006831
Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000045491
17850857 - 17955482
104626