Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_17919976_17927497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17919976 - 17927497

Intron Length:

7522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGCT

5'SS Class:

major

3'SS Sequence:

TTATTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATTTTTAACA

Flanking Amino Acid:

IEILIENHEKIFNTVPETPP

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

70.5

38.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.9

0.76

0.9

81.2

Minor 5ss

37.4

-1.4

3.6

56.7

47.6

Minor BPS

80.5

0.95

83.59

30.1

Associated Gene:

Gene:

ARHGAP26

Ensembl Gene ID:

ENSAPLG00000006831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031486

17849694 - 17955482

105789

ENSAPLT00000030321

17849694 - 17955482

105789

ENSAPLT00000023136

17837009 - 17955482

118474

ENSAPLT00000046468

17850857 - 17955482

104626

ENSAPLT00000007163

17849694 - 17958385

108692

ENSAPLT00000045491

17850857 - 17955482

104626