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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17974612_17977481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17974612 - 17977481

Intron Length:

2870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

GTCAATGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TATGTCTTAAAG

Flanking Amino Acid:

CMKTLLLLSTIPKEGLKSQS

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

71.3

34.5

Major BPS

77.8

0.69

78.2

31.8

Major PPT

68.9

0.42

60.5

44.5

Minor 5ss

32.3

-2

3.4

39.2

Minor BPS

62.3

0.25

1.6

65.42

42.2

Associated Gene:

Gene:

NR3C1

Ensembl Gene ID:

ENSAPLG00000007318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038971

17973128 - 18033949

60822

ENSAPLT00000007621

17973128 - 18117423

144296