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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17977613_17984020_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17977613 - 17984020

Intron Length:

6408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

GCTTATTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTCTGCTTATTT

Flanking Amino Acid:

LCFAPDLIINEQRMNLPCMY

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

71.6

40.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

79.1

0.65

0.9

76.4

37.3

Minor 5ss

36.3

-1.5

2.7

40.2

Minor BPS

58.9

0.36

79.24

43.6

Associated Gene:

Gene:

NR3C1

Ensembl Gene ID:

ENSAPLG00000007318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038971

17973128 - 18033949

60822

ENSAPLT00000007621

17973128 - 18117423

144296