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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17987035_17991250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17987035 - 17991250

Intron Length:

4216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCA

5'SS Class:

strong_major

3'SS Sequence:

AAAACTTTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATTATCT

Flanking Amino Acid:

KCLQAGMNLEARKTKKKIKG

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.7

33.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

60.7

0.24

51.3

42.6

Minor 5ss

-0.4

2.5

59.7

44.7

Minor BPS

64.7

0.54

1.9

87.15

37.9

Associated Gene:

Gene:

NR3C1

Ensembl Gene ID:

ENSAPLG00000007318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038971

17973128 - 18033949

60822

ENSAPLT00000007621

17973128 - 18117423

144296