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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17991368_17995503_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17991368 - 17995503

Intron Length:

4136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TTTTTTGTGACT

Flanking Amino Acid:

CKVFFKRAVEGQHNYLCAGR

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

75.5

40.6

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

77.4

0.62

0.9

70.8

39.8

Minor 5ss

33.7

-1.9

3.2

48.4

47.1

Minor BPS

61.8

0.45

85.97

34.5

Associated Gene:

Gene:

NR3C1

Ensembl Gene ID:

ENSAPLG00000007318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038971

17973128 - 18033949

60822

ENSAPLT00000007621

17973128 - 18117423

144296