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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17995668_18031374_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17995668 - 18031374

Intron Length:

35707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCTTCAGTATAA

Flanking Amino Acid:

GRPAFSNGYSSPGIRSDVSS

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.7

34.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

86.5

0.82

0.7

80.3

31.8

Minor 5ss

37.5

-1.4

2.8

52.1

44.3

Minor BPS

43.5

-0.5

2.4

61.58

44.3

Associated Gene:

Gene:

NR3C1

Ensembl Gene ID:

ENSAPLG00000007318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038971

17973128 - 18033949

60822

ENSAPLT00000007621

17973128 - 18117423

144296