Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18193523_18194552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18193523 - 18194552

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

GGTTAACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTTCTATTAATT

Flanking Amino Acid:

CLAFGATLLLAGKIQFGYVY

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

72.5

0.51

43.8

Minor 5ss

33.8

-1.8

3.2

45.3

43.7

Minor BPS

63.4

0.5

1.6

79.3

36.4

Associated Gene:

Gene:

YIPF5

Ensembl Gene ID:

ENSAPLG00000007623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007918

18192568 - 18200635

8068