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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18204959_18209862_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18204959 - 18209862

Intron Length:

4904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TCCCTTTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

32.3

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

79.3

0.66

0.8

75.9

31.2

Minor 5ss

24.1

-3

3.3

43.4

Minor BPS

65.6

0.49

1.3

67.58

39.4

Associated Gene:

Gene:

KCTD16

Ensembl Gene ID:

ENSAPLG00000018353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045309

18204646 - 18264632

59987