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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18472549_18477915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18472549 - 18477915

Intron Length:

5367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAA

U12 Branch Point Sequence:

TTGTGTGTAAAG

Flanking Amino Acid:

QSFLKQGVKKGIKIMETLLQ

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

57.5

0.19

1.4

61.7

43.1

Major PPT

89.3

0.88

0.7

87.9

29.5

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

44.2

-0.5

2.4

55.75

45.9

Associated Gene:

Gene:

PRELID2

Ensembl Gene ID:

ENSAPLG00000007685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007970

18471697 - 18489634

17938

ENSAPLT00000025353

18471697 - 18489830

18134