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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18561655_18563152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18561655 - 18563152

Intron Length:

1498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TAATTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTCAGTAATT

Flanking Amino Acid:

SGQGESPLGIRAHQMSKEVW

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.7

0.62

73.4

41.4

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

51.6

0.13

2.2

75.36

41.7

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002