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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18563292_18563934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18563292 - 18563934

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CCATCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTGTCTGATAC

Flanking Amino Acid:

EHACSRTYGLGTRLPWDEQW

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

80.6

0.69

0.8

72.3

37.5

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

45.4

-0.3

1.8

56.89

41.4

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002