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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18564018_18564117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18564018 - 18564117

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TATTGCTTACAG

Flanking Amino Acid:

QTSECLKHLETFCEETRRNF

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

30.2

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

0.74

0.9

76.7

37.3

Minor 5ss

43.2

-0.7

2.9

57.4

40.7

Minor BPS

49.2

-0.2

2.2

61.76

45.7

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002