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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18564184_18564275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18564184 - 18564275

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCATGGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTATGATAAACT

Flanking Amino Acid:

DECVVALCDQWYLDYGEVGW

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

100

1.24

0.5

100

Major PPT

68.1

0.41

61.9

39.8

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

49.9

0.07

2.3

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008579

18550202 - 18579203

29002

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737