Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18564362_18565375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18564362 - 18565375

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTATGTCAT

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

GTATAATGATCT

Flanking Amino Acid:

KLIQKMMVDNDEAMIFMEPE

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

70.6

41.3

Major BPS

76.8

0.67

40.9

Major PPT

77.2

0.61

0.7

72.8

25.6

Minor 5ss

43.4

-0.7

2.8

57.5

40.5

Minor BPS

44.6

-0.3

2.1

65.57

43.7

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002

ENSAPLT00000033733

18550202 - 18574192

23991