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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18565454_18566102_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18565454 - 18566102

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCCTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

CTCTCTTTACTC

Flanking Amino Acid:

RVYLKAFYEGVMLVDGYKGQ

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

80.7

33.7

Major BPS

81.6

0.78

0.8

24.9

Major PPT

87.8

0.85

0.7

82.7

25.9

Minor 5ss

38.7

-1.3

2.8

47.9

41.8

Minor BPS

58.9

0.26

1.6

65.01

41.9

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002