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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18568184_18569484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18568184 - 18569484

Intron Length:

1301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTATAGTAATT

Flanking Amino Acid:

VPVVKELMGEEILGAALSAP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

35.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

68.5

0.42

0.9

63.2

33.2

Minor 5ss

45.7

-0.5

2.8

61.4

37.1

Minor BPS

49.3

0.03

2.2

77.29

39.4

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002