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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18569711_18570052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18569711 - 18570052

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTGGTGACT

Flanking Amino Acid:

KVLEPYPAKLSGLRGKNIFL

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.4

0.55

0.7

65.8

30.3

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

47.3

-0.1

2.6

76.43

40.6

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002