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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18571643_18572755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18571643 - 18572755

Intron Length:

1113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCCTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATC

Flanking Amino Acid:

IIKDKAKGKKSKAAAKTGSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.8

39.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.47

0.9

70.8

35.4

Minor 5ss

39.7

-1.2

3.4

49.2

Minor BPS

66.1

0.48

1.6

78.18

31.2

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002