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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18572897_18573330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18572897 - 18573330

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TAACTCTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CTACCAATAACT

Flanking Amino Acid:

GLHCTGMPIKACADKLKREM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

69.1

0.43

0.9

67.1

38.9

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

51.6

0.13

1.9

73.1

42.8

Associated Gene:

Gene:

LARS1

Ensembl Gene ID:

ENSAPLG00000008145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033733

18550202 - 18574192

23991

ENSAPLT00000017437

18550202 - 18576938

26737

ENSAPLT00000008579

18550202 - 18579203

29002