Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18640994_18642973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18640994 - 18642973

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTTAA

5'SS Class:

major

3'SS Sequence:

TATCTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTAATAATA

Flanking Amino Acid:

WEKPQELKEKEKMEEKIKEP

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

73.2

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.9

0.72

0.9

77.6

35.4

Minor 5ss

38.5

-1.3

49.6

46.6

Minor BPS

53.7

0.11

1.8

70.2

35.6

Associated Gene:

Gene:

TCERG1

Ensembl Gene ID:

ENSAPLG00000009432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022136

18628018 - 18661744

33727

ENSAPLT00000009859

18628018 - 18660960

32943