Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18690957_18758537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18690957 - 18758537

Intron Length:

67581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

AGTTACTTAAAT

Flanking Amino Acid:

KGTIDIGVTEADIISTVEFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

68.3

0.65

1.6

82.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032056

18666019 - 18758766

92748