Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18800155_18801031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18800155 - 18801031

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

TGCAGCTTAACC

Flanking Amino Acid:

QRDFIVFNREKVQHQHNETQ

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

0.45

0.9

62.3

39.8

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

59.5

0.28

1.9

67.92

43.5

Associated Gene:

Gene:

STK32A

Ensembl Gene ID:

ENSAPLG00000009674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032450

18775775 - 18802262

26488

ENSAPLT00000010083

18775159 - 18802262

27104