Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18807150_18807417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18807150 - 18807417

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TGTGTCTGAGCA

Flanking Amino Acid:

RMSVIWDKAVATGKMDENQF

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.7

34.5

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

66.8

0.38

1.1

62.8

Minor 5ss

31.8

-2.1

3.3

40.1

39.9

Minor BPS

49.7

-0

1.8

64.68

41.6

Associated Gene:

Gene:

DPYSL3

Ensembl Gene ID:

ENSAPLG00000010132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032944

18805079 - 18823209

18131

ENSAPLT00000022473

18804976 - 18838086

33111

ENSAPLT00000010677

18805079 - 18836620

31542

ENSAPLT00000033133

18805079 - 18838086

33008