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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18871282_18872838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18871282 - 18872838

Intron Length:

1557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTCT

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATGCAATC

Flanking Amino Acid:

KRQIKDLEEKFLFLFLFFSL

Intron Amino Acid Position:

823

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.5

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.8

0.96

0.6

88.9

20.3

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

46.8

-0.2

2.3

67.19

38.9

Associated Gene:

Gene:

JAKMIP2

Ensembl Gene ID:

ENSAPLG00000011443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012002

18871209 - 18912631

41423