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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18874164_18875071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18874164 - 18875071

Intron Length:

908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTGCATCGACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

CCATCTCTAACT

Flanking Amino Acid:

RKQALDQAYMRIQELEATLY

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

62.5

0.28

1.1

55.5

44.3

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

0.39

1.7

73.09

43.9

Associated Gene:

Gene:

JAKMIP2

Ensembl Gene ID:

ENSAPLG00000011443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019017

18872590 - 18912631

40042

ENSAPLT00000012002

18871209 - 18912631

41423

ENSAPLT00000023420

18865721 - 18912631

46911

ENSAPLT00000020431

18872590 - 18912631

40042