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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18875150_18876194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18875150 - 18876194

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCAAA

5'SS Class:

major

3'SS Sequence:

TCCTTCATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

AAATCCTTCATT

Flanking Amino Acid:

QKMMELESDMEQFCKIKGYL

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

66.8

40.3

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

78.5

0.64

0.8

73.8

29.6

Minor 5ss

37.4

-1.4

3.1

44.4

45.6

Minor BPS

63.7

0.51

1.7

76.62

39.9

Associated Gene:

Gene:

JAKMIP2

Ensembl Gene ID:

ENSAPLG00000011443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020431

18872590 - 18912631

40042

ENSAPLT00000019017

18872590 - 18912631

40042

ENSAPLT00000012002

18871209 - 18912631

41423

ENSAPLT00000023420

18865721 - 18912631

46911