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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18879825_18881392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18879825 - 18881392

Intron Length:

1568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ATATTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

AGATCATGAATT

Flanking Amino Acid:

IKRNQELLDKIEKLEAENSR

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.6

31.5

Major BPS

0.62

1.4

85.7

34.9

Major PPT

80.3

0.68

0.8

78.5

35.1

Minor 5ss

47.6

-0.2

2.4

62.3

42.5

Minor BPS

54.7

0.23

1.7

70.9

39.3

Associated Gene:

Gene:

JAKMIP2

Ensembl Gene ID:

ENSAPLG00000011443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020431

18872590 - 18912631

40042

ENSAPLT00000019017

18872590 - 18912631

40042

ENSAPLT00000012002

18871209 - 18912631

41423

ENSAPLT00000023420

18865721 - 18912631

46911