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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18890895_18891792_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18890895 - 18891792

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACGCAGG

5'SS Class:

weak_major

3'SS Sequence:

TACCAATAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TTACCAATAAAC

Flanking Amino Acid:

GDGSEHCSSPDLRRNQKRIA

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.2

47.7

Major BPS

0.42

1.3

60.1

46.3

Major PPT

57.8

0.18

1.1

51.7

40.4

Minor 5ss

40.6

-1

3.1

57.9

46.4

Minor BPS

48.3

-0.1

65.19

38.9

Associated Gene:

Gene:

JAKMIP2

Ensembl Gene ID:

ENSAPLG00000011443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020431

18872590 - 18912631

40042

ENSAPLT00000019017

18872590 - 18912631

40042