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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18891087_18891792_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18891087 - 18891792

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACGCAGG

5'SS Class:

weak_major

3'SS Sequence:

TCCCCCAAACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TCAATCTTAAAA

Flanking Amino Acid:

GDGSEHCSSPMISYKRANNN

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.2

47.7

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

55.6

0.13

0.9

48.8

Minor 5ss

40.6

-1

3.1

57.9

46.4

Minor BPS

61.4

0.35

1.5

65.98

Associated Gene:

Gene:

JAKMIP2

Ensembl Gene ID:

ENSAPLG00000011443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012002

18871209 - 18912631

41423

ENSAPLT00000023420

18865721 - 18912631

46911