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Intron Name: Anas_platyrhynchos_platyrhynchos_14_18893889_18896883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18893889 - 18896883

Intron Length:

2995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCAACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTGTCTCAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

65.5

0.35

0.9

63.8

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

70.2

0.71

1.6

87.74

37.8

Associated Gene:

Gene:

JAKMIP2

Ensembl Gene ID:

ENSAPLG00000011443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019017

18872590 - 18912631

40042