Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18925420_18925713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18925420 - 18925713

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TGTAAAATAATC

Flanking Amino Acid:

YFLYMYSRYLSGEKKKDDET

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

80.7

0.69

0.8

75.9

32.8

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

45.1

-0.3

59.76

38.5

Associated Gene:

Gene:

CDC23

Ensembl Gene ID:

ENSAPLG00000012078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039004

18914569 - 18928283

13715

ENSAPLT00000012623

18914569 - 18927790

13222