Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18976721_18976811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18976721 - 18976811

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGAAG

5'SS Class:

major

3'SS Sequence:

CTTTTTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TTGATTTGGACT

Flanking Amino Acid:

AQSTQEIHEKVLNEAVGALM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

65.6

41.7

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

84.3

0.77

0.8

80.6

31.4

Minor 5ss

24.8

-2.9

3.1

29.2

43.7

Minor BPS

53.1

0.18

1.5

71.63

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013236

18963406 - 18983238

19833