Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_18981107_18981237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18981107 - 18981237

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCACTG

5'SS Class:

major

3'SS Sequence:

TTTCCCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTCCCCCCACA

Flanking Amino Acid:

ALDVHESEPFSFAQGPLKDA

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

45.6

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

79.2

0.66

0.7

73.1

25.2

Minor 5ss

47.2

-0.3

2.9

65.1

46.1

Minor BPS

47.6

-0.1

2.3

70.3

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013236

18963406 - 18983238

19833