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Intron Name: Anas_platyrhynchos_platyrhynchos_14_194409_195235_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
194409 - 195235

Intron Length:
827

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGT|GTACGTACC

5'SS Class:
major

3'SS Sequence:
CCCTCTCCGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCCAT

U12 Branch Point Sequence:
CCTCACGAAATT

Flanking Amino Acid:
EEIMDTLNATVPHTSASDLS

Intron Amino Acid Position:
159

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.3
0.36
1.2
62.9
41.8

Major BPS
72.3
0.55
1.2
80.7
33.2

Major PPT
67.9
0.4
0.9
61.1
35.1

Minor 5ss
37.9
-1.4
2.9
47.4
41.2

Minor BPS
40.9
-0.6
2.3
57.51
45.7

Associated Gene:

Gene:
ARHGEF37

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

193261 - 201827
8567