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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2078826_2083593_R

Intron Information:

Intron Rank:

133476

Intron Class:

major

Intron Phase:

Intron Coordinates:

2078826 - 2083593

Intron Length:

4768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TTCTTTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTACCCTACGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

75.6

35.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

88.4

0.86

0.7

81.3

30.8

Minor 5ss

47.7

-0.2

2.8

71.6

38.3

Minor BPS

47.9

-0.1

2.2

68.78

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025965

2077934 - 2084004

6071