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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2115837_2116105_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2115837 - 2116105

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCAAA

5'SS Class:

major

3'SS Sequence:

TATTTCTAATAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTATTTCTAATA

Flanking Amino Acid:

TRTNELLKSKLCEDGVQKKM

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

68.7

37.6

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

0.32

1.2

70.2

39.2

Minor 5ss

44.9

-0.6

2.6

57.3

Minor BPS

60.8

0.34

1.6

72.19

33.8

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045750

2112776 - 2125890

13115

ENSAPLT00000013285

2112776 - 2125039

12264