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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2116193_2116690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2116193 - 2116690

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTGC

5'SS Class:

major

3'SS Sequence:

TTTATTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTGTTTATTT

Flanking Amino Acid:

LRNKRDAKEKTALAKQEDME

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

66.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

89.3

0.88

0.7

27.8

Minor 5ss

45.9

-0.4

2.8

59.2

39.8

Minor BPS

60.4

0.41

83.14

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045750

2112776 - 2125890

13115

ENSAPLT00000013285

2112776 - 2125039

12264