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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2119284_2119595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2119284 - 2119595

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

TTCCGGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAATTTTAAAAT

Flanking Amino Acid:

EVLSQLQQEKELSASIQQRL

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.5

0.42

0.9

61.4

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

53.3

0.18

1.7

70.66

40.2

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045750

2112776 - 2125890

13115

ENSAPLT00000027358

2112776 - 2125039

12264

ENSAPLT00000013285

2112776 - 2125039

12264