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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2121381_2123034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2121381 - 2123034

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGGAC

5'SS Class:

major

3'SS Sequence:

ATGTTTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

GGTTCATTATGG

Flanking Amino Acid:

AKDKAKEECARMLLEAQTKL

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

36.6

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

79.4

0.66

0.8

77.7

Minor 5ss

35.7

-1.6

3.5

49.3

47.3

Minor BPS

-0.4

2.2

54.29

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045750

2112776 - 2125890

13115

ENSAPLT00000027358

2112776 - 2125039

12264

ENSAPLT00000013285

2112776 - 2125039

12264