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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2123191_2123289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2123191 - 2123289

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCTAT

U12 Branch Point Sequence:

GAGAGCTGAAAT

Flanking Amino Acid:

QKKLEADQRSRKTESEDMTS

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.1

83.9

30.3

Major BPS

0.37

1.3

64.5

42.5

Major PPT

82.2

0.72

0.7

81.3

30.7

Minor 5ss

46.2

-0.4

2.8

66.9

44.4

Minor BPS

44.4

-0.3

57.42

44.2

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045750

2112776 - 2125890

13115

ENSAPLT00000027358

2112776 - 2125039

12264

ENSAPLT00000013285

2112776 - 2125039

12264