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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2123390_2123636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2123390 - 2123636

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTATGTATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TTAGACTTAAAA

Flanking Amino Acid:

ELHNKTKPFQRQLDAFEAEK

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

77.4

0.62

0.9

73.9

40.2

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

59.7

0.3

1.7

70.86

40.7

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045750

2112776 - 2125890

13115

ENSAPLT00000027358

2112776 - 2125039

12264

ENSAPLT00000013285

2112776 - 2125039

12264