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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2124243_2124953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2124243 - 2124953

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CCAAACTTAATA

Flanking Amino Acid:

NISPRTPLKEGNRN*

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

0.75

78.6

Major PPT

84.2

0.77

0.8

78.2

34.9

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

53.6

0.11

1.6

57.77

41.8

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027358

2112776 - 2125039

12264

ENSAPLT00000013285

2112776 - 2125039

12264