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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2124243_2125501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2124243 - 2125501

Intron Length:

1259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

AATTTGTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

NISPRTPLKEGYADFFPGPR

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.54

70.8

43.8

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

HMMR

Ensembl Gene ID:

ENSAPLG00000012722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045750

2112776 - 2125890

13115