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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2134787_2135672_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2134787 - 2135672

Intron Length:
886

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGAATT

5'SS Class:
strong_major

3'SS Sequence:
TGTTTCCTCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAC

U12 Branch Point Sequence:
ATTTTTTCACCT

Flanking Amino Acid:
CRQLAEKRMLDPSVKGTFHW

Intron Amino Acid Position:
230

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.2
0.88
0.8
86.3
28.9

Major BPS
90.1
0.99
0.7
91.6
20.3

Major PPT
77.5
0.62
0.8
70.3
36.4

Minor 5ss
39.6
-1.2
3.2
55.5
42.8

Minor BPS
56.2
0.27
1.8
77.81
39

Associated Gene:

Gene:
MAT2B

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2129366 - 2137858
8493

2128121 - 2137858
9738