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Intron Name: Anas_platyrhynchos_platyrhynchos_14_216255_244046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

216255 - 244046

Intron Length:

27792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGGG

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GTGAGCTCACCT

Flanking Amino Acid:

FVFNYLADSQYEVSGEEHLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

56.8

42.6

Major BPS

0.28

1.1

63.1

35.8

Major PPT

77.7

0.62

0.7

72.4

25.7

Minor 5ss

-3.1

3.3

28.9

43.6

Minor BPS

43.6

-0.4

2.2

61.66

47.6

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020124

216171 - 255731

39561

ENSAPLT00000010401

216171 - 255918

39748